rachellyne

Results 14 issues of rachellyne

Adding a filter through the column summary as opposed to in the query builder or the filter icon creates an incorrect == constraint in the generated code. The constraint should...

bug

There seems to be a problem with the pathways enrichment widget - it only shows KEGG enrichment. When you select Reactome, the enrichment does not work.

bug

List upload is limited to 100000, which is fine for most things but would mean you can't for example upload a list of all human exons on chromosome 1 (although...

enhancement

As suggested by Jerven: ` 


P05067-1
APP770
PreA4 770


 ` If there is an altermative product comment take the identifier of the "displayed" item as the identifier of the cannonnical...

data

Copying a list from the myMine lists page in humanMine give an error: This page isn’t workingwww.humanmine.org is currently unable to handle this request. HTTP ERROR 500 Copying a list...

bug

The folllwing series of commands causes an error (HumanMine and FlyMine): Run a template Return to query via trail Click on Edit query from template form: java.lang.NullPointerException at org.intermine.web.struts.TemplateAction.templateFormToTemplateValues(TemplateAction.java:371) at...

bug

Uploading lists with a large number of non-gene or non-matching identifiers either does not work or takes so long it effectively does not work. A number of data analysis methods...

enhancement
data

Support email Hello, I have found this when mapping names: I have tried to map CALM1, CALM2 and CALM3 as 'genes', to get the uniprotID's. The result table shows correct...

data

Genes are displayed as feature densities which looks a bit odd (not sure where the density part is coming from). See mouseMine for example of how they should look.

JBrowse

These new data types are in the ncbi human gff file. We have not loaded for now, but could look at where they fit into the model: epigenetically_modified_region enhancer_blocking_element response_element...