pymc-examples
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pymc-devs
Examples of PyMC models, including a library of Jupyter notebooks.
# Notebook proposal **Title**: Conditional Autoregressive (CAR) Models for Spatial Data ## Why should this notebook be added to pymc-examples? The `CAR` distribution is within the multivariate distributions that PyMC...
# Notebook proposal **Title**: Bayesian Decision Analysis ## Why should this notebook be added to pymc-examples? PyMC lacking an example of a Bayesian Decision Analysis, much in the style of...
File: https://github.com/pymc-devs/pymc-examples/blob/main/examples/pymc3_howto/howto_debugging.ipynb Reviewers: > The sections below may still be pending. If so, the issue is still available, it simply doesn't > have specific guidance yet. Please refer to [this...
**Bayesian regression with truncated or censored data**: **[Notebook url](https://www.pymc.io/projects/examples/en/latest/generalized_linear_models/GLM-truncated-censored-regression.html#implementing-truncated-and-censored-regression-models)**: ## Issue description Running the following chunk of code in the corresponding notebook ```python fig, ax = plt.subplots(figsize=(10, 3)) with pm.Model()...
File: https://github.com/pymc-devs/pymc-examples/blob/main/examples/pymc3_howto/updating_priors.ipynb Reviewers: > The sections below may still be pending. If so, the issue is still available, it simply doesn't > have specific guidance yet. Please refer to [this...
`res = pm.find_MAP(vars=[z], fmin=optimize.fmin_l_bfgs_b)` gave me the error ```python /usr/local/lib/python3.7/dist-packages/fastprogress/fastprogress.py:74: UserWarning: Your generator is empty. warn("Your generator is empty.") --------------------------------------------------------------------------- TypeError Traceback (most recent call last) in () 1 smoothing...
* Update notebook to follow style guide, addresses https://github.com/pymc-devs/pymc-examples/issues/172 * Rename notebook to `bayesian_ab_testing_introduction.ipynb`, to make its purpose clear compared to future notebooks about Bayesian A/B testing.
LKJ
File: https://github.com/pymc-devs/pymc-examples/blob/main/examples/case_studies/LKJ.ipynb Reviewers: @AlexAndorra ## Context ## Known changes needed Changes listed in this section should all be done at some point in order to get this notebook to a...
File: https://github.com/pymc-devs/pymc-examples/blob/main/examples/survival_analysis/survival_analysis.ipynb Reviewers: > The sections below may still be pending. If so, the issue is still available, it simply doesn't > have specific guidance yet. Please refer to [this...
**updating_priors**: **[Notebook url] (https://docs.pymc.io/en/v3/pymc-examples/examples/pymc3_howto/updating_priors.html)**: For the following code section, to get to the posterior trace, I had to change to `trace.posterior.alpha.mean(axis=0)`, etc. I am not sure if this is correct....
