pymc-examples
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pymc-devs
Examples of PyMC models, including a library of Jupyter notebooks.
File: https://github.com/pymc-devs/pymc-examples/blob/main/examples/ode_models/ODE_with_manual_gradients.ipynb Reviewers: > The sections below may still be pending. If so, the issue is still available, it simply doesn't > have specific guidance yet. Please refer to [this...
Hi, I am very new to `pymc`. I have mostly used `rstan` for the bayesian computations required for my research as it is mostly popular for the implementation of the...
**Error in log_gaussian_cox_process Notebook**: **pymc-examples/examples/case_studies**: ## Issue description When switching to PyMC v4.2.2 in log_gaussian_cox_process Notebook, I get in cell 19 with the call > spp_trace = pm.sample_posterior_predictive( > trace,...
The current requirements file is out of date and potentially too minimal https://github.com/pymc-devs/pymc-examples/blob/dce63a03b894d39a0a39a4773f9a0226078391c1/requirements-write.txt#L1-L9 # Todo - [ ] Replace `pymc3` with `pymc`, possibly with a `>=4.0` version tag. - [...
**Notebook title**: generally, most **Notebook url**: generally, most ## Issue description In updating the notebooks and the "Author" section, I have been adding this information: ``` ## Authors * Moved...
Second part of the HSGP tutorial with @bwengals 🍾 Ready to review folks! PS: Also took the opportunity to improve the formatting of the intro of the Basic HSGP NB,...
**WIP do not merge** This PR partially addresses #555 in that it adds more causal thinking into the existing moderation notebook, but not the mediation notebook. - [x] Add in...
**Notebook title**: Variational Inference: Bayesian Neural Networks **Notebook url**: https://www.pymc.io/projects/examples/en/latest/variational_inference/bayesian_neural_network_advi.html ## Issue description One needs to pass all the variables to a single Minibatch call so that their slices are...
https://github.com/pymc-devs/pymc/pull/7047 depreciates `pm.ConstantData` and `pm.MutableData` (again), so the [data container notebook](https://www.pymc.io/projects/examples/en/latest/fundamentals/data_container.html) no longer reflects best practices. It should be updated to: 1. Remove the explainer about the differences between `MutableData`...
**Notebook title**: Reparameterizing the Weibull Accelerated Failure Time Model **Notebook url**: https://www.pymc.io/projects/examples/en/latest/survival_analysis/weibull_aft.html ## Issue description Opening paragraph begins: > Dataset > The [previous example notebook on Bayesian parametric survival analysis](https://docs.pymc.io/notebooks/bayes_param_survival.html)...
