Paul Wighton

Thanks @kaczmarj! I'll also try to find people to review this.

Thanks @kaczmarj, those are some helpful leads.

Thanks @stebo85. Out of curiosity, does the machine you're running the container on have a GPU? On Fri, May 22, 2020, 03:50 Steffen Bollmann wrote: > Hi @pwighton , >...

Thanks @relyativist, I haven't had much time since to try to get it working.

I've been working on this: https://github.com/pwighton/neurodocker/tree/20210825-refactor It's a mess right now, but mostly works :)

Has there been any more progress on coming to a consensus on how to BIDSify muti-echo T1w data? Specifically multi-echo MPRAGE data (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2408694/)? I can see above in this thread...

Thanks @agahkarakuzu! That was super informative. > Having `InversionTime` would also hint, but IIRC, the main concern here was to infer directly from file name that it is inversion prepared...

Hi @ghisvail, I'm working on updating dockerhub now. I've created a branch [here](https://github.com/pwighton/freesurfer/tree/20221012-docker/docker) with a docker subfolder to hold dockerfiles for multiple versions, and perhaps multiple base containers at some...

[freesurfer/freesurfer](https://hub.docker.com/repository/docker/freesurfer/freesurfer/tags?page=1&ordering=last_updated) now has containers for versions 7.3.0, 7.3.1 and 7.3.2. I can add a container for 7.3.3 [once there is a centos8 release](https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/7.3.3/) > For that, you might want to...

Sure @stebo85, but I wont be able to look at this until September. Feel free to ping me again if I forget!