Philippe Rocca-Serra

Following-up call with : @PhilipvD @Brunasv @nirupamaBenis and @Pabloalarconm -> follow-up to prepare a first draft and finalize content during November bookdash.

@biohackathon-2022, discussion with Nuria about this content: https://github.com/elixir-europe/biohackathon-projects-2021/blob/main/projects/36/bhxiv/paper.md @daniwelter

should have been closed with #469

@tburdett, @olgavrou finally managed to build with stable release of Zooma bypassing EBI's internal coconut repo STEP1: obtain virt-jena-1.8 and virt-jdbc-4.0.1 jar. STEP2: manual installation to local .m2 repository mvn...

discussed during editorial call on 04052023: rather than creating a recipe, improve the introduction section to link to the DSW, its documentation and relation with ELIXIR resources.

discussion during bookdash #22 (30.11.2022): - "minimal information checklist / metadata profile" to build in the workflow file -> - make explicit that workflow files should contain a license, the...

as discussed today: - [ ] ISA Tab specification allow only 1 "Raw Data File" per Assay Table - [ ] "Assay Name" is needed as "Raw Data File" field...

PRS to test this situation, i.e., several files generated by one data acquisition: | Sample Name | Protocol REF | MS Assay Name | Raw Data File | Protocol REF...

> The only conflict is where I deleted a line in testing that was printing. Can this be resolved? @ptth222 there is indeed an outstanding merge conflict but resolving it...

@ptth222 finally managed to find time and issue causing the problem while merging into my local branch. All tests are now passing locally but need to investigate one more case....