Philippe Rocca-Serra

Results 70 comments of Philippe Rocca-Serra

@ptth222 , for additional context, the request came from the following needs: - [ ] to provide the result of assays with a single response variable (ie non-massively parallel assays)...

Hi @shawntanzk Thanks for reaching out. A couple of things from your use case. - [ ] The first thing would be to have a type F-beta score to STATO....

Thx for the pointers @shawntanzk . Adding some material to this issue as well: - https://github.com/JCVenterInstitute/NSForest

@shawntanzk awesome ! thx for the PR. bear with me!

> I went through the code in the "model" folder, the JSON Schemas in "resources/schemas/isa_model_version_1_0_schemas", the JSON Schemas on https://isa-specs.readthedocs.io/en/latest/isajson.html, and the specification on https://isa-specs.readthedocs.io/en/latest/isatab.html to try and find inconsistencies....

@ptth222 , no apologies needed at all. We were hoping to push the corrections sooner , thus avoiding you that pain. I am the one to apologise for these inconsistencies....

@Zainab-ik absolutely. thank you for the request. It will be available in the coming release.

@sellth @glyg, thank you for highlighting these discrepancies. We'll address these issues along with updating the website and jupyter notebooks to reflect all the recent fixes to the API. The...

+1 we ran into similar issues when @terazus performed a significant refactoring of the code base. I guess at the time, it was thought it was a good idea to...

Hi all, apologies to the delay. fixed in master will work on a release asap