Pradeep Rajasekhar

Apologies, its my first time doing this. Where do I enter these commands? I use the github website for this..

Thank you. Sorry for the trouble . I was trying to undo the changed and didn't realise that would happen. On Sun, Apr 28, 2019, 4:59 AM Maxim Belkin wrote:...

Thank you. Ideally, I would have liked to do it, but I am still figuring how to contribute using GitHub website and do not want to mess things up. I...

The idea was to show that the same built-in function can be used for looking at two different data structures, and to introduce the len() function. It may make sense...

@andreped @smistad I have similar issues when using any tiff which is not converted using vips. I think this happens if its a non-pyramidal tiff or if its exported from...

Thanks for this @andreped That gives me more context! I downsampled the images just so I don't have to deal with large .tif file exports and I can upload small...

Awesome! Thanks for that.. I'd be keen on the workaround when its ready. In regard to the training a model, I think hematoxylin may be the only consistent marker across...

Sorry, with the workaround do you mean: `running my new pipeline (including color deconvolution, using the resulting H-image as input for your trained model, should work well on your raw...

Yup, that sounds great..I'll get on to that. Also, due to issues with it being clinical data, I can't data publicly. The link can be emailed to you. Would you...

Hi @andreped I've uploaded the colour deconvolution from QuPath and the FP predictions. https://cloudstor.aarnet.edu.au/plus/s/WaKwYICmASsV4TY The images have been downsampled by 2 for fast prediction using the CD3 model. I used...