Peter

This is caused, as the error implies, by the missing function [`fill_alpha`](https://ggplot2.tidyverse.org/reference/fill_alpha.html) which is a `ggplot2` function. It was just added in version [`3.5.0`](https://ggplot2.tidyverse.org/news/index.html#ggplot2-350). I had the same error with...

The key line here is `/bin/sh: line 1: gcc: command not found`. Make sure that gcc is available in your environment, i.e. installed and added to PATH. The requirements needed...

Thanks for considering the support of the `VisiumV2` class in the future. I've also opened an issue in the Seurat repository regarding the handling of the different image classes. A...

The easiest workaround without downgrading to Seurat v4 is to use the coordinates directly from the spaceranger output (`/outs/spatial/tissue_positions.csv`) and bind them to the meta data of the SeuratObject. To...

Since this issue is still open, I take the chance to note that this becomes more of a problem if the plots you'd like to combine come from another package....

Ended up here because of #122 which made me realize that I was suffering from a problem long fixed in the develop branch but the conda-forge version is super outdated....