CRISPRme
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pinellolab
I noticed that I was not getting any indels back when running the current docker against my own guides, so I ran it against the test guides and still did...
Hi all, Thanks for the tool! I have a few questions 1) Are the _alt and _random files from the hg38 genome used as part of the search with the...
Running against the gnomAD v4.0.0 (converted with CRISPRme) fails in the Integrating Results phase. Error message Traceback (most recent call last): File "/opt/conda/opt/crisprme/PostProcess/./resultIntegrator.py", line 492, in if float(elem) == 0:...
**I have faced the problems** hg38+hg38_1000G_test_20bp-NGG-SpCas9.txt_guides.txt_gencode_encode.hg38.bed_6_2_2_chrX_KI270881v1_alt.total.cluster.txt.tmp_sort.txt file have specific symbols in third columns. And I had faced with error blows,I want to know if this problem can be solved,any ideas...
Dear team, We are trying to install this software and are somehow stuck at this step. conda create -n crisprme python=3.8 crisprme -y Collecting package metadata (current_repodata.json): done Solving environment:...
**Describe the bug** Hi! I am trying to run CRISPRme with a converted gnomAD VCF but the run fails. I am using v2.1.0 by conda. The `Genome` folder contains chr22...
