Padraig Gleeson

Example for testing with Keras->MDF conversion: 3D convolutional neural network

1

https://keras.io/examples/vision/3D_image_classification/#define-a-3d-convolutional-neural-network @Onoyiza This is the example we discussed yesterday. Will probably need some additional onnx operators used

Why aren't Condition and ConditionSet being generated in our documentation?

5

Both missing from https://mdf.readthedocs.io/en/latest/api/Specification.html. That page is generated from https://github.com/ModECI/MDF/blob/main/docs/README.md, which is a markdown export of https://github.com/ModECI/MDF/blob/main/src/modeci_mdf/mdf.py, which has classes Condition and ConditionSet...

Would be great to see the MDF/ModECI logo on here: https://onnx.ai/supported-tools.html Perhaps under Frameworks & Converters, or in a new category at the bottom on Interoperability..? Need to make sure...

Error on DDM model for pytorch

1

@davidt0x The [pytorch_ddm.py](https://github.com/ModECI/MDF/blob/development/examples/PyTorch/pytorch_ddm.py) model is failing for some reason, but only on ubuntu (it hasn't been changed recently though). See e.g. https://github.com/ModECI/MDF/actions/runs/4295791247/jobs/7486678614 FAILED tests/test_examples.py::test_example[additional_args0-examples/PyTorch/pytorch_ddm.py] - AttributeError: 'torch._C.BoolType' object has no...

Update README update development section to point to examples for CI testing

3

Update

https://github.com/openworm/.github/blob/main/testsheet/README.md

https://openworm.org/science.html#resources

http://canopus.caltech.edu/virtualworm/Virtual%20Worm%20Blend%20File/

Create JupyterLab based version of Dockerfile

2

e.g. with Sibernetic precompiled and example Jupyer notebook to show usage. See also #282