Padraig Gleeson
Padraig Gleeson
A NeuroML2 reader class has been implemented here: https://github.com/NeuralEnsemble/neuroConstruct/blob/master/src/ucl/physiol/neuroconstruct/neuroml/NeuroML2Reader.java This is currently used for importing networks in NeuroML2 format. This file should be made more general (for importing channels &...
- [ ] Add RegionsTest.java in https://github.com/NeuralEnsemble/neuroConstruct/tree/master/tests/ucl/physiol/neuroconstruct/project - [ ] Add unit test on each region type (RectangularBox, SphericalRegion, ConicalRegion, CylindricalRegion) to ensure isPointInRegion(), isCellWithinRegion(), etc. work as expected
- [x] Remove # in nC.bat - [ ] check running with NRN 7.4 - [x] update checkOsb.bat - [x] GENESIS morph reader seems to have disappeared - [x] check...
These colours can be changed in the source code by altering these lines: https://github.com/NeuralEnsemble/neuroConstruct/blob/master/src/ucl/physiol/neuroconstruct/gui/SimulationRerunFrame.java#L1554 but it would be nice to update the gui:  so this can be set &...
Following file gives errors when imported using: ``` ./nC.sh -neuroml ../temp/neuronal-circuit.xml ``` neuronal-circuit.xml: ``` arbor_group arbor_group ``` Error: ERROR: More than one spherical/zero length segment!! - Segment: 2 is spherical/zero...
On the suggestion of @ccluri and @hglabska, an option should be added to nC to save not just the individual currents through each of the synapses on a cell, but...