peterdfields

orthofuser.mk run failure

1

Hi @macmanes I'm trying to run orthofuser.mk on a set of transcriptomes (same species) that have been generated using the Oyster River Protocol (ORP). I'm running a docker container that...

core dump error on import

20

Hi, I'm trying to import a bcf file that was generated by first converting a GATK vcf to bcf with bcftools. I'm getting the following error: ``` Program: tomahawk-beta-0.7.1 (Tools...

Is it possible to generate the stable coordinate in the GAF file that PanAligner generates as described in https://github.com/lh3/gfatools/blob/master/doc/rGFA.md?