pdhrati02

> Check this link: https://jokergoo.github.io/ComplexHeatmap-reference/book/heatmap-annotations.html#mark-annotation Hi @jokergoo, Thank you for pointing this out, however it doesn't wouldn't work well if rows are clustered. In my plot I have some associations...

Hi @jokergoo, Sure thing. Please find attached a small example dataset. This is a subset of the original one. [eg.txt](https://github.com/jokergoo/ComplexHeatmap/files/9249321/eg.txt) Aim is to highlight top 3 and bottom 3 after...

Hi @jokergoo , Thank you for your quick response, however there is still one issue that prevails. So basically I want this:  And then to just highlight the top...

I did get this warning message: It seems you are using RStudio IDE. `anno_mark()` needs to work with the physical size of the graphics device. It only generates correct plot...

@miguensblanco Hi, were you able to solve this issue? I am getting the same error. Thanks

Hi @ycl6 , Thank you for the detailed explanation at each step in this post, I have a slightly related question. Your code about top5 for each group and rest...

Hi @ycl6 , absolutely. I have added a small subset of the metadata and the taxa table in the excel file. [example.xlsx](https://github.com/joey711/phyloseq/files/14692621/example.xlsx) This is how I make the phyloseq object:...

Hi @ycl6 , thank you for the guide and I will make sure to learn and follow it. And apologies for the wrong sample name, I must have made a...

Hi @ycl6 , yes you are right. The issue is that some taxa are top5 in one subject, some may be top5 in multiple subjects which is resulting in about...

Hi @ycl6, Thank you very much really for helping me with this I do understand better the steps you have used and the logic behind it. I am looking for...