Panos Bravakos

Dear Johan, I sent you an email with the input data and commands. Hope you recieved it. Cheers Panos

Dear Johan, Thanks for the immediate response. I followed the instructions (both for the tree in the nexus file and the MrBayes command) but I think I still have a...

Hi, I am having the exact same error when trying to run agb on the fastg output of Spades with the following command ``` agb.py --graph assembly_graph_with_scaffolds.gfa -a SPAdes ```

Yes, it is the following: ``` ERROR: -l too small for reads: a = '@NC_018417.1_156282_156681_0:0:0_0:0:0_0/1' b = '' ```

Thanks. I did add the -l 150 parameter but now it seems I get a new errror: ``` Building DAG of jobs... Using shell: /bin/bash Provided cores: 20 Rules claiming...