Partha Sarathi Tripathy

Hello, I tried to upgrade methplotlib, but unfortunately it still shows the old version. I have installed it via conda. On the conda page the version shows 0.20.1, but still...

I successfully installed methplotlib to 0.20.1. But I got this error... methplotlib -m methylation_calls_CpG_sm1.tsv methylation_frequency_sm1.tsv -n calls frequencies -w mtDNA:1-16626 -g /cluster/projects/nn9337k/as1_nanopolish/all_context/sequence.sorted.gtf.gz --simplify -b /cluster/projects/nn9337k/as1/reference.bed Reading methylation_calls_CpG_sm1.tsv would be faster...

Hello, I have attached the log file generated from methplotlib. [methplotlib_20220905_0847.log](https://github.com/wdecoster/methplotlib/files/9487390/methplotlib_20220905_0847.log)

Dear Wouter, Any updates related to the above error? I have checked pip installation with **pip check**. It also says **no broken requirements found**. But still I am getting the...

Sure. Please find the attached files for calls and frequency. [methylation_calls_CpG_sm1.txt](https://github.com/wdecoster/methplotlib/files/9535200/methylation_calls_CpG_sm1.txt) [methylation_frequency_sm1.txt](https://github.com/wdecoster/methplotlib/files/9535201/methylation_frequency_sm1.txt)

I upgraded pandas to latest version 1.4.4 (earlier version was 1.4.3). **But I got the same error.** Please help.

Dear Wouter, I created a new conda environment as per your suggestions. But I am still facing the same error. Please find the attached env.yaml file (in text here). Waiting...

Dear Wouter, I checked my environment with **pip check**. There is no broken requirements.