oleg2153
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oleg2153
combine.abf() function has a useful "quiet=FALSE" parameter. Unfortunately, It is not possible to pass this parameter when calling coloc.abf() (which internally calls combine.abf). Suggestion: https://github.com/chr1swallace/coloc/blob/0afe6070a02d571f038c4f6269e1f36842aaa34f/R/claudia.R#L324-L325 ``` coloc.abf
An idea to add check for variant naming consistency. Otherwise coloc.susie errors out with a data.table error which was a bit tricky to debug: ``` Error in `:=`(idx1, cs1$cs_index[idx1]) :...