scisorseqr

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some question about using scisorseqr

3

Hi,Thanks for developing such a good tool! When I am using the getbarcodes step ,I use the following command: GetBarcodes(fqFolder = fastqFolder, BCClustAssignFile = bc_clust, outputFolder="/data/R02/yuanwsy/scisorseqr/scisorseqresult/", chemistry = "v3", concatenate...

yuanwsy

Scisorseqr and MAS-Seq reads

2

Has anyone used scisorseqr with segmented MAS-seq reads from PacBio? I didnt think this would affect the read structure much but I am detecting very low Barcode content: Total reads...

goeringr

added code to create GTF from tss, polya, and intron chain coords

1

fairliereese