Ilya Shlyakhter

Could also make a separate "errata" document, and add to the original only footnotes with a hyperlink to the erratum. But it seems that the "official version of the spec"...

If an errata document, should an unofficial version with the errata applied (and highlighted?) be maintained as well? Should the original be annotated with links/footnotes to errata?

I'm trying to change the conda recipe to build spades from source. Are the compilation warnings at https://circleci.com/gh/bioconda/bioconda-recipes/69783 safe to ignore? On Fri, Aug 16, 2019 at 6:07 AM Anton...

I get a config dir error from spades.py --test when building from source: https://circleci.com/gh/bioconda/bioconda-recipes/69783 On Fri, Aug 16, 2019 at 6:07 AM Anton Korobeynikov wrote: > It certainly may happen...

Thanks! On MacOS I get errors saying the include parallel/algorithms is missing: https://circleci.com/gh/bioconda/bioconda-recipes/69820 Any suggestions on how to fix this? On Fri, Aug 16, 2019 at 3:20 PM Anton Korobeynikov...

@asl yes, one of the dependencies of this recipe is llvm-openmp, from https://github.com/conda-forge/openmp-feedstock/tree/master/recipe

Thanks @asl . Is the binary MacOS distribution from http://cab.spbu.ru/files/release3.13.0/SPAdes-3.13.0-Darwin.tar.gz built with `-DUSE_GLIBCXX_PARALLEL=1` ? Is that expected to make a significant difference? Also, at http://cab.spbu.ru/software/spades/ the download link to MacOS...

@andreott @caspargross @dswan @indexofire @openpaul can you try with the updated conda package?

Try `conda create -p /path/to/metaSPades3.14 —override-channels -c comda-forge -c bioconda -c defaults spades=3.14.0`

I want to use it for CI. But that requires also implementing the saving of coverage (saving per-test coverage, then merging saved coverage of skipped tests, after mapping of corresponding...