Noah Legall

While trying to implement LPCA into an analysis, I find it hard to know how to construct the methods. I think it would be helpful to include examples of how...

Greetings, Doing a pangenome analysis, I've encounter the question multiple times as to why we need to do a full de novo assembly if there is a reference genome present...

FastTree command for accessory_binary_genes.fa.newick

1

Greetings, my question is rather quick. I simply want to know how the FastTree command is constructed in order to give the fastest alignment possible using this program. Looking to...

Validation in Bacteria

10

I feel like this type of method would work as a fantastic competitor to bacterial whole genome alignment software such as Mauv/progressiveMauve. Have you tried validating this software with bacterial...

download command when in 'headless' mode (chrome)

1

Since Firefox version 48, Mozilla requires all add-ons to be signed. Until recently, Firefox support in Selenium was exclusively provided by an add-on. As this add-on is not currently signed,...

Whole Genome Alignments

1

Hello, I'm using seq_io to do some sliding window analysis of a 4Mb genome, but the size of the sequence remains limited. How should I configure my Rust program for...