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                                            Netanel Loyfer

bam2pat support for nanopore data

Hi, I implemented a beta version of `bam2pat` that supports ONT bam files (MM, ML). I will upload it soon

bam2pat support for nanopore data

wgbstools bam2pat now supports ONT bam files. I tested it on bam files from multiple sources, but I am positive I missed some cases. Please let me know in an...

bam2pat for nanopore data has some problem in recognising CIGARX string

Thank you for bringing this to my attention. I added support for CIGARX strings

issue when use `beta_to_450k`

Hi, This error message is sent from the file path validation method. My guess is it can't find the dictionary file mapping CpG index to Illumina EPIC ids. This is...

Question about Input Format for PAT File Generation

Works for cram files