pydra
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nipype
Pydra Dataflow Engine
*Work in progress* See methodology [here](https://mypy.readthedocs.io/en/stable/existing_code.html#introduce-stricter-options).
## Types of changes - New feature (non-breaking change which adds functionality) ## Summary Gets env info for PROV tracking. ## Checklist - [x] I have added tests to cover...
## Types of changes - New feature (non-breaking change which adds functionality) ## Summary as discussed with @djarecka, add datalad interface (adopted from mriqc) to pydra task ## Checklist -...
### What would you like changed/added and why? When connecting a lazy-out field to a downstream node, there are often minor operations to be applied to the field value, e.g....
Hi there! I'm building a workflow that take as input some strings and want to use a modified version of those lazy inputs to set some inputs of a node....
Addition to the `Environment` class to think in the future: - [ ] setting `setup` and `teardown` methods, possibly using `ContexMenager`, see [here](https://github.com/nipype/pydra/pull/516#discussion_r1331690829) - [ ] changing to `Dataclass`, see...
The [Oar](https://oar.imag.fr/) scheduler is widely used in France, including mesocentre supercomputers (e.g., GRICAD), [INRIA](https://www.inria.fr/en) supercomputers, [Grid5000 testbed](https://www.grid5000.fr/w/Grid5000:Home) and other platforms. Nypipe does have a OAR plugin here: https://github.com/nipy/nipype/blob/master/nipype/pipeline/plugins/oar.py We created...
Hey all, After several tries, I can't managed to perform this use case: ## What are you trying to accomplish? I try to create a `DockerTask ` with a Directory...
when debugging [first-level glm for pydra tutorial](https://github.com/nipype/pydra-tutorial/blob/2a08fba3e254f4e7e2b187d5955421c3fcbbaf00/notebooks/6_firstlevel_glm_nilearn.md) we (@yibeichan @djarecka) encountered an error related to hash for a specific node. Node: ``` # get glm report @pydra.mark.task @pydra.mark.annotate( {'model': ty.Any,...
I'm finding that VS Code is having trouble locating pydra task packages, which is a bit frustrating because being able to link/peek the source would be very helpful, and I...