pydra

pydra copied to clipboard

adding test that can check the error reporting from the submitter, see the error message improvement in #581

djarecka

output_file_template does not support File, Path or Directory types

2

What version of Pydra are you using? 0.19 What were you trying to do? Use a field with type `pathlib.Path`, `pydra.engine.specs.File` or `pydra.engine.specs.Directory` What did you expect will happen? the...

tclose

Initial attempt at adding infile tracking

7

Adding infile tracking for BIDS-PROV.

rcali21

pydra.__init__.py needs to be identical across sub-packages according to docs

13

_What version of Pydra are you using?_ 0.19 _What were you trying to do?_ Install sub-package in editable mode in order to pass automated tests _What did you expect will...

tclose

"pydra.engine.specs.Path" type not satisfiable when type checking is switched on

5

What version of Pydra are you using? pydra==0.19 pydra-mrtrix3==0.1.1 What were you trying to do? Use an interface with a `Path` input (e.g. MRConvert from pydra-mrtrix3) within a workflow when...

tclose

Catch inadvertent `attrs.NOTHING` file outputs and raise error

1

**What would you like changed/added and why?** Currently, if there is an issue with file output handling by a task and a file path is not set correctly, it is...

tclose

**What would you like changed/added and why?** For the task cache to be invalidated when the output handling functions/templates change **What would be the benefit? Does the change make something...

tclose

updates: - [github.com/pre-commit/pre-commit-hooks: v4.5.0 → v4.6.0](https://github.com/pre-commit/pre-commit-hooks/compare/v4.5.0...v4.6.0)

pre-commit-ci[bot]

Handle None types

2

## Types of changes - Bug fix (non-breaking change which fixes an issue) ## Summary * Handles None in field types, e.g. `int | None` instead of `typing.Optional[int]` ## Checklist...

tclose

fixes issues with super->sub-class auto-cast and handles MultiInputObj coercion

2

## Types of changes - Bug fix (non-breaking change which fixes an issue) ## Summary * fixes bugs with super->sub-class auto-casting, including when the sub-classes are part of a union....

tclose