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Add datalad task

Open yibeichan opened this issue 2 years ago • 1 comments

Types of changes

  • New feature (non-breaking change which adds functionality)

Summary

as discussed with @djarecka, add datalad interface (adopted from mriqc) to pydra task

Checklist

  • [x] I have added tests to cover my changes but the test didn't pass locally, got an error TypeError: __init__() missing 1 required positional argument: 'func'; will discuss with Dorota through meeting
  • [ ] I have updated documentation (if necessary)

yibeichan avatar Nov 10 '22 20:11 yibeichan

Codecov Report

Base: 81.16% // Head: 80.87% // Decreases project coverage by -0.28% :warning:

Coverage data is based on head (5d5a154) compared to base (c2cc452). Patch coverage: 64.61% of modified lines in pull request are covered.

:exclamation: Current head 5d5a154 differs from pull request most recent head edac2c8. Consider uploading reports for the commit edac2c8 to get more accurate results

Additional details and impacted files
@@            Coverage Diff             @@
##           master     #594      +/-   ##
==========================================
- Coverage   81.16%   80.87%   -0.29%     
==========================================
  Files          20       21       +1     
  Lines        4391     4456      +65     
  Branches     1262        0    -1262     
==========================================
+ Hits         3564     3604      +40     
- Misses        823      852      +29     
+ Partials        4        0       -4     
Flag Coverage Δ
unittests 80.87% <64.61%> (-0.29%) :arrow_down:

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
pydra/tasks/datalad.py 64.61% <64.61%> (ø)
pydra/engine/task.py 93.23% <0.00%> (-0.31%) :arrow_down:
pydra/engine/core.py 92.96% <0.00%> (-0.16%) :arrow_down:
pydra/engine/helpers.py 86.05% <0.00%> (ø)
pydra/engine/workers.py 18.76% <0.00%> (ø)

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codecov[bot] avatar Nov 10 '22 20:11 codecov[bot]