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nf-core
Repository to host tool-specific module files for the Nextflow DSL2 community!
- updated to Harshil Alignment™️ format - updated data types for the parameters so that we can use them in the hadge pipeline
Bff
- Generating cell hashing calls from a matrix of count data by calling `GenerateCellHashingCalls` - This modules was created to be included in the `hadge` pipeline - Currently the module...
### Have you checked the docs? - [x] [nf-core website: troubleshooting](https://nf-co.re/usage/troubleshooting) - [x] [nf-core modules documentation](https://nf-co.re/docs/contributing/modules) ### Description of the bug Dear @khersameesh24 and @maxulysse, I am trying to run...
## PR checklist Closes #XXX - [ ] This comment contains a description of changes (with reason). - [ ] If you've fixed a bug or added code that should...
I noticed that the output file was set to be a VCF instead of a gVCF when I set `ext.args = "--gvcf --tmp-dir tmp"`. It seems that the string and...
## PR checklist The aim is to standardize all wave containers to use https as url for singularity and not oras. Might need to be added to nf-core tools check....
## PR checklist Closes #XXX - [ ] This comment contains a description of changes (with reason). - [ ] If you've fixed a bug or added code that should...
## PR checklist Close #7242. As #7251 needs help, this PR patches it and adds the KMA_KMA module. For credits, the original author @Krannich479 is added as the author and...
