pan-genome-analysis
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neherlab
Processing pipeline for pan-genome visulization and exploration
Hi - I have analyzed and uploaded 30 bacterial genomes from environmental isolates to the local host/8000. Is there a way to extract all duplication events individual genomes? Thanks Markus
python3
Dear developers, I wonder if you are thinking in implementing a python3 version of this tool. Thank you very much
Dear all, I have been having the following issue when installing panX. I followed the steps as in the site and used miniconda as indicated. `Traceback (most recent call last):...
Hi Richard - hope this is my last question for you. I uploaded my output files to the server. Is there a way to extract the information in the 'gene...
So I know this is not the GitHub repository for the pan-genome-visualization package but I am super lost regarding how to make the visualization work. What exactly are the arguments...
Is it possible to calculate support values in the core genome tree? Something like this here: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4810242/ Thank you very much.
