dbsnp issues

Results 9 dbsnp issues

Sort by recently updated

Merge graf-pop-test to master

Hello! Is it possible to merge https://github.com/ncbi/dbsnp/tree/graf-pop-test branch to master? Thank you for your work!

serge2016

How to get CHR & POS info on Hg38 using rs Id information?

I have a list of SNP rs ids (>1M) for which I would like to find the CHR & POS information. Can you please suggest a suitable tutorial or Jupyter...

Mahantesh-Biradar

Update eUtils.ipynb

Added examples of eSummary and eLink.

qiangwang03

Error when running graf pop in other folder

Hi, I have in a folder the plink files. When running grafpop (which is in another folder) I got the following: ``` ~/software/Graf_over2.4/GrafPop/grafpop my_plink_project result.txt Assertion `FileExists(ancSnpFile.c_str())` failed in AncestrySnps.cpp...

dietmarfdz

dbSNP page links to older ftp site

this page https://www.ncbi.nlm.nih.gov/snp/ links to https://ftp.ncbi.nih.gov/snp/ but i thik it is now https://ftp.ncbi.nlm.nih.gov/snp

cmdcolin

Grafpop with builds < 37 and no rsids.

Hello @lonphan @jinyu-ncbi, I am working on a compilation of various datasets for a data catalog purpose. I wanted to use Grafpop for ancestry predictions. However, many of them orignate...

rajwanir