BioSentVec
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ncbi-nlp
BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences
Hi, This is a very good model for bio embedding, however, I need to add more train on my medical text dataset for further internal prediction. How can I do...
Hi all, thank for providing the embeddings for the BioSentVec model 21GB (700dim, trained on PubMed+MIMIC-III). Awesome work that helped me a lot! I'd like to have the BioSentVec model...
I used your pretrained word embedding and sent embedding on PubMed+MIMIC-III. And I would like to conduct my experiments on only PubMed corpus. So, Can you sent me the pretrained...
The MayoSRS and UMNSRS_similarity datasets mostly contain phrases. Did you use mean pooling to get the results you reported or some other pooling mechanism for ngrams longer than 1? Thanks
I was trying to follow the given - BioSentVec_tutorial.ipynb But after downloading the BioSentVec and trying to load I have got AttributeError.
Hi, Thanks for this very valuable resource. I would like to know the month/year of downloading of the PubMed corpus used to train the BioWordVec models? That is, articles in...
I just want to use the pretrained model of bio sent2vec in my local machine with almost 12 Gigabyte RAM, and the model size is almost 22 Gigabyte, and when...
I built a Tensorflow model on top. of BioSentVec Emebeddinngs. Now when I am trying to deploy the model, I need BioSentevec at inference time to preprocess the inputs. I...
While exploring nearest neighbors, have seen many words which seem to be invalid words. ``` import fasttext model = fasttext.load_model('./BioSentVec/models/BioWordVec_PubMed_MIMICIII_d200.bin') model.get_nearest_neighbors('kidney', 30) ``` This gives the following output: ``` [(0.9160109162330627,...
Hello, I wanted to use context embeddings for words to perform word similarity tasks. Is there a way to get the context vectors for words using the fastText model file....
