Matthieu Muffato

Results 24 issues of Matthieu Muffato

### Description of feature Hello, We've found that `nf-core download` doesn't know how to use `$NXF_SINGULARITY_LIBRARYDIR`(it only knows `$NXF_SINGULARITY_CACHEDIR`). Although the following should do the trick (I haven't tested it)...

enhancement
download

### Description of feature Hiya, For maintainability, it would help if the following archives could exist untarred under `/lustre/scratch123/tol/resources/nextflow/test-data`: ``` ./resources/ascc/asccTinyTest_V2.tar.gz ./resources/ascc/asccTinyTest.tar.gz ./resources/treeval/TreeValTinyData.tar.gz ./resources/treeval/TreeValSmallData.tar.gz ``` The untarring itself I could...

enhancement

### Description of feature Whilst reviewing the location of all test data, I found these occurrences of`/nfs` paths that don't exist: ``` treeval/assets/local_testing/nxOscDF5033.yaml: synteny_path: /nfs/treeoflife-01/teams/tola/users/dp24/treeval/TreeValTinyData/synteny/ treeval/assets/local_testing/nxOscSUBSET.yaml: synteny_path: /nfs/treeoflife-01/teams/tola/users/dp24/treeval/TreeValTinyData/synteny/ treeval/assets/local_testing/nxOscDF5033-BGA.yaml: synteny_path:...

bug