Lars Kasper
Lars Kasper
Dear Leah, Thank you for confirming the sign of `StartTime` and indeed, `log_files.relative_start_acquisition` should then be zero. I can reproduce your example, and the cardiac curves (looks like a pule...
After a bit of detective work, I found a possible reason: In `tapas_physio_preprocess_phys_timeseries` for `sub-0019`, PhysIO finds that the time vector of the physio logging is only 838.6s long, but...
Dear Alexandre, there are `NaN` values in your cardiac time series (you will see some gaps in the raw data plot, I marked some with yellow in the screenshot). It...
Dear Alexandre, if this is Siemens data, you can also read it in directly with PhysIO, instead of converting it to BIDS first. We can read most of the common...
Dear Alexandre, it's great to hear that the PhysIO reader for the native Siemens VE format works! It is very common for this format to skip certain time points (ticks),...
Dear Nikita, My apologies, but I didn't have time to include your PR into the upcoming TAPAS release. I am working with a student on a summer project to improve...
Dear Johanna, it's not really deprecated (just not recommended :-)), but unlike `mean` requires the Matlab `stats` toolbox. I have sketched a solution here: #206 , but paste it here...
This command will give you an overview on the files and products (Matlab Toolboxes) PhysIO uses: ``` [fList,pList] = matlab.codetools.requiredFilesAndProducts('tapas_physio_main_create_regressors.m') ```
Thank you, @benoitberanger , for resolving the issue. BTW: I haven't forgotten about the pull request, hopefully makes it into the September release :) All the best, Lars
Dear Jörg, thank you very much for your thoughtful and detailed request. I was really impressed by the degree of scrutiny you applied to compare the physiological logging and timing...