mpoelchau
mpoelchau
- JBrowse version: 1.16.11 and lower - Web browser being used: Chrome Hi Jbrowse team, We recently had an accessibility expert review the tools that we offer for our database,...
- JBrowse version: 1.16.6 In previous versions of jbrowse (up to 1.16.5 as far as i can tell), running flatfile-to-json.pl with the --bed and --subfeatureClasses options would give you a...
During a web accessibility review of our site, it was pointed out that the Tripal default method of dynamically altering page structure is difficult for assistive technology to navigate. An...
## BUG/ERROR report ### System information * Tripal Version: 3 * Drupal Version: 7.59 * PostgreSQL Version: 9.6.16 * PHP Version: 7.3.13 ### Issue description We'd like to use the...
When using gff3_merge, I had to use the user-defined file option. The sequence extraction and blast seemed to run fine, but the replacement still didn't work. I tried the same...
Thanks for publishing a really useful resource! I've used the python version successfully with the NCBI entity linker, but when I use the gbif backbone on the same dataset I...
The Travis tests are out of date and we will be moving to Jenkins for automated tests soon. In the meantime we should disable the tests since they're a bit...
Google analytics has not been reporting for /webapp/blast since October 7th, 2020 (which is when we deployed the newest version of the code to production). I suspect this means that...
We'd like to add link-outs, similar to the existing Apollo link-outs to the genome reference, to transcript and protein features. The idea would be to build Apollo URLs with the...
Technically we allow multiple spaces in the organism name to accommodate sub-species, e.g. Diabrotica virgifera virgifera. However, this causes the database files on the right in the query page not...