mpoelchau

This would be really useful in principle. Just to clarify, though - the use case here is to do an initial sanity check on individual annotations, right? As opposed to...

Thanks for looking into this! If it happens in Jbrowse2 rather than 1 that would be great, too. I don't think there's an expectation as to where the tab goes,...

Okay, thanks - I'll give canvasfeatures+tabix a try.

Sorry about the delayed response on this issue, Colin! I've finally given canvasfeatures+tabix a try (needed to update our servers first...). Bed files display fine that way in Jbrowse, but...

Yeah, it might be nice to have a list of all of the different storeClasses. Adding "storeClass": "JBrowse/Store/SeqFeature/BEDTabix" made the above error go away, but the track data won't display....

Sure, here you go: https://apollo.nal.usda.gov/apollo/4271957/jbrowse/index.html?loc=NW_022170249.1%3A37405952..37406327&tracks=DNA%2CAnnotations&highlight= The bed track is the 'Splice junctions' track at the bottom of the list Yep, it works in 1.16-ish but not in 1.13-ish. Here's a...

also per @childers the jbrowse version is maint/1.12.5-apollo

Awesome, that helps! Apollo seems to work now too on our prod setup... Is there a different type/style that would display the subfeatures? Right now the features display as contiguous...

got it, thanks for the feedback!

@srobb1 thanks for posting this - I ran into the same issue this week as well (I should have loaded an ontology prior to the gff but forgot). Having this...