Kevin R. Thornton

Results 47 issues of Kevin R. Thornton

This issue tracks what needs to be done to eliminate the need to sort the edges associated with new births. The method has been used in [fwdpy11](https://github.com/molpopgen/fwpdy11) for about 3...

C API

See here: https://discuss.pixls.us/t/gimp-python-not-available-in-ubuntu-20-04/17769/10

- [x] nSL/iHS - [x] H1, H12 et al. - [ ] Hudson's Snn - [ ] Fst - [x] lHaf - [ ] Wall's B, Q, etc. - [...

Do this for all non-deprecated types.

Currently, seeding for R replicates is done via call to an RNG. It would be nice to keep that option, but also allow a list of R seed values to...

enhancement

Currently, we specify dependencies in more than one place: 1. pyproject.toml 2. file in in requirements/ This redundancy leads to the obvious problems. We can solve the problem by: 1....

The C++ back end module (`fwdpy11._fwdpy11`) contains code in `cpp/ts/count_mutations.cc` that is not used anywhere in the Python API. We should either restore its visibility (see #1271, for example) or...

Recent discussions elsewhere demonstrate that the specification of the genetic value objects is confusing. Specifically, the `ndemes` field is a kludge. Ideally, `gvalue` would be a list of one object...

C++ back end
UI

The C++ code is getting long and would be much more readable if we used functions instead of long control blocks. We may even get a compile-time speedup!

C++ back end

The change made in eed6689805d1719c67d934b2f7c68f182fc86c4b partially copy/pastes code found in `fwdpy11/evolvets/simplify_tables.hpp`. It would be nice to reduce the duplication.

C++ back end