Mohith Reddy Arikatla

Glitch or Feature? Either methods do not represent the true distribution of an allele when gaps are involved

3

Hello! I use ggseqlogo to produce logoplots for HIV variants. I recently have come across an inconsistency that I have questions about. Here is an explanation to the issue I...

<scale>` argument of `guides()` cannot be `FALSE`. Use "none" instead as of ggplot2 3.3.4

1

Hey! I'm using ggseqlogo to produce logoplots of Bstringset objects on R. The only line of code I've used ggseqlogo is the line below. out = ggseqlogo(sequences, method = 'prob'...

100% training accuracy - unable to navigate mistake

1

Hi Marcus, I managed to make a dataset that has separate 10+ nucleotide handles on either side of the unmod G and mod G randomers with the structure: `LeftHandle1-NNNNGNNNN-RightHandle1` and...

Workflow to extract chunks for a randomer dataset

1

Hi Marcus, We have finally managed to get a dataset that has good coverage of randomers with and without 8-oxoG at the center surrounded by 4 random bases on either...