mmterpstra

Results 11 issues of mmterpstra

### Question Can you add header anchors to markdown-it? Because of the github support if it would be nice if you also do it. ### Possible solution This is on...

Feature Request

2x time speedup according to: https://github.com/brentp/mosdepth

You might know already but: Check $? for execution with system or backticks. >Like system, backticks put the child process exit code in $? . If you'd like to manually...

The parameter list assumes that every new run is a new library preparation. This might cause artifacts not to be removed by MarkDuplicates. My suggestion is to make this parameter...

enhancement
parameters

This is a remark on https://github.com/broadinstitute/cromwell/blob/master/docs/tutorials/HPCSlurmWithLocalScratch.md there is a feature on slum config to edit the sbatch command. You could add in a find and replace in the config to...

Default application.json not found in classpath in precompiled jar on github (affecting multiple releases tested version 86 and 85). Tested to not be affected version 79/56. Main error below. Should...

issue #194 quick fix or else the tools needs to be removed from the documentation and this install script.. Don't pull because I didn't test the bootstrap script.

This is an alternative install on Ubuntu/debian which is more easy. Review and update if needed. - Install with R development from package manager - code in backticks (Probably unwanted...

Travis functionality. Consider to squash merge.