mktrost

Unfortunately, this feature is not yet implemented. It is an enhancement that we would like to make. We appreciate the enhancement request. Unfortunately I don't yet have a timeline for...

Help would be great. My hours are limited right now. Here is some info on areas that will need updating/some ideas on how to do it. I am likely missing...

Either of those settings should work (and did when I just tested them). Is your index valid? That block size seems very large. Can you point me to your test...

Are you only running into this problem when you have a file that is just unmapped reads? That is something I hadn't thought of before - the index file contains...

I don't think I'm familiar with bam_readcount. Is that a tool you are writing using libStatGen? (or am I just drawing a blank on this tool?) Could it be that...

I had not considered secondary reads so when I put in the validation, I didn't see a situation where the cigar would have value, but there would be no sequence....

I updated libStatGen so that the cigar/seq length validation should only occur if the seq is not '*'. Please use the most recent libStatGen and let me know if this...

Are there any messages prior to the ld? Does it list what the undefined symbols are?

Do you have the development version of zlib installed?

Hmm, can you provide additional info? Or if you can't post it here, can you send it to [email protected]? Thanks!