mirahan

difficulty reproducing the ABC score of K562's in Nature 2021

4

Hi, We are trying to reproduce the ABC scores of the K562s (Fulco2019) scores in Nature 2021. We keep getting values that are somewhat correlated but not quite. the first...

Hi, we are finding this error during a merging of three different gtfs that were generated with psiclass. I know psiclass is not your program, but could you take a...

bamcollate2 not reporting all reads

2

Hi, I am trying to use bamcollate2 on a RNA-seq bam file aligned with map-splice. But, after processing with bamcollate2 I am missing reads that were mapped to multiple locations....

It is giving me an error about JWT. I am hoping to use an ngc token instead, since jwt carts expire every hour. [ec2-user@ip-10-1-0-193 ~]$ sracp --token ~/prj_10324.ngc -a "SRR4307426"...