TuoMin

icon indicating a website link https://tust.edu.cn/

icon company tianjin university of science and technology icon location tianjin icon location a tianjin university of science and technology student

Results 4 comments of TuoMin

Running cd-hit with 26Gb data set is too slow

I have the same question with you, I use cd-hit-est with fasta file input. maybe the fasta file is slower than encoded database file? have you solve this question? could...

Running cd-hit with 26Gb data set is too slow

hello，to be honest, i chose to use mmseqs in the end. this may be faster in the big datasets. good luck.

python depend failed

> I speculate your setup attempts to fetch openbabel from pypi.org instead of the OS' package manager. If this is the case, check if the by bypass with openbabel-wheel equally...

Why not use the -b argument to generate BRAW files?

me too when I use this ./ccmpred -h, there are not -b options Usage: ./ccmpred [options] input.aln output.mat Options: -n NUMITER Compute a maximum of NUMITER operations [default: 50] -e...