Mikhail Shugay

But the sort was performed using tetramers, not pentamers, as the methods and table says. They used pentamers for mixed lymphocyte reactions: they incubated dendritic cells with these pentamers and...

OK!

Summary done. Still thinking on the round of proofreading and adding ``verified`` labels

Also see https://github.com/antigenomics/vdjdb-db/issues/136 https://github.com/antigenomics/vdjdb-db/issues/215 https://github.com/antigenomics/vdjdb-db/issues/221 https://github.com/antigenomics/vdjdb-db/issues/43 https://github.com/antigenomics/vdjdb-db/issues/256

Added https://github.com/antigenomics/vdjdb-db/issues/252

Hmm, Kabat is a numbering scheme for defining CDR1-3 positions (which differs from IMGT), not segment naming convention. Naming conventions are listed at http://imgt.org/IMGTrepertoire/index.php?section=LocusGenes&repertoire=nomenclatures&species=human&group=TRBV

#2 #3 #4 #5 #6 #7 #8 #9 #10 #11 #12 #13

Thats exactly it. As for parent gene names - we can also fetch them from iEDB for consistency.. although I recall there were some naming deviations in iEDB itself. This...

Next round of 200+ tcr:pmhc pairs from PDB upcoming

We also need to list such papers here