mihem

I am not 100% this is related, however I also experienced a similar problem (e.g. no mitochondria genes after running velocyto). I use 10x and so I use `velocyto run10x`....

Hi Aleksandr, thanks for the swift response. Sorry, could you provide the code how to calculate the V.end? E.g. there is FR1.nt and FR1.aa, and the length (is this `nchar`...

Thanks again. Converting this into code with the example data results in: ``` bcr_data$full_clones |> mutate(V.end2 = str_length(FR1.nt) + str_length(CDR1.nt) + str_length(FR2.nt) + str_length(CDR2.nt) + str_length(FR3.nt)) |> mutate(J.start2 = str_length(Sequence)...

Solution that works fine for me: ``` (set-company-backend! 'inferior-ess-r-mode '(company-R-args company-R-objects company-dabbrev-code company-R-library :separate)) ``` Then fast `company-R-objects` is called also in the REPL and not slow `company-capf` (relying on...

Glad that it also worked for you. I was suprised that nobody else reported this problem yet because this occurs with the default doom emacs ess setting and this slowness...

Thanks! You are right. I saw that JJ Allaire said that lint was not working in .qmd in Vscode here https://github.com/quarto-dev/quarto/issues/208. The thread is was talking about earlier https://github.com/REditorSupport/vscode-R/issues/1198 was...

No maintainer, and this does not directly answer your question. But I use Vspacecode, which has lots of great keybinding predefined https://github.com/VSpaceCode/VSpaceCode Unfortunately, it does not have a R major...

Hi @mhkowalski thanks your for response. Sure. ``` sc_merge

Thanks for your repnse @mhkowalski . I had a large object with ~500 000 cells, which is not optimal for testing. So I produced a minimal reproducible (well if you...

@mhkowalski sorry any update on this?