Michael Witting

I'm also not aware of people working on it. Would be a great addition. I also tried to read LC-IMS-MS data, which is some kind of 2D separation. `MSnbase` reads...

`F1.X` denotes spectra from file one and `F2.X` spectra from file two, e.g. `F1.S0001` means first spectrum from file one and `F1.S0002` second spectrum and so on...

Great. I will test it later this day. Do you think that SpectrumList fits to MSnbase? For me it would fit better to XCMS, since it would be data structure...

The function `featureSpectra` throws the following error: `Error in DataFrame(feature_id = fids, peak_id = vapply(strsplit(names(res), : different row counts implied by arguments` `chromPeakSpectra` works fine. The `writeMgfData` function writes a...

Okay... I will test it later. Thanks for taking care!

I'm getting the following error when using `writeMgfData`: `Error in (function (classes, fdef, mtable) : unable to find an inherited method for function ‘writeMgfData’ for signature ‘"Spectra"’`

`MSnbase` version 2.7.9

Top! It is running now... I will process and test with the test data.

What about having a function that filter functions for the `Spectra`, e.g. keeping only the spectrum for one feature which has the highest TIC or having a merged consensus spectrum?...

Okay... I will use this workaround. At the moment I only want the highest TIC. Would be good to tweek the `combineSpectra` method to accept also centroided data from `Spectrum1`...