Michael Schwier

Great to know you are working on it. Let me know when you get there :) I also think this will make a big difference in terms of integrating niftynet...

This is still an issue. I just build caffe (which is now a part of pytorch) and I am getting the same error: `usr/local/lib/python2.7/dist-packages/onnx/onnx_cpp2py_export.so: undefined symbol: _ZNK6google8protobuf7Message13SpaceUsedLongEv` One thing I...

How to solve this then, if caffe is using a different version? I tried building caffe with BUILD_CUSTOM_PROTOBUF=OFF, forcing it to use the 2.6.1 protobuf that was installed already -...

Same problem here. I'm running the notebook in an official [Caffe release docker](https://github.com/BVLC/caffe/tree/master/docker) in CPU mode.  @mohamed-ezz @PatrickChrist @FelixGruen Any help/hints towards solving this would be appreciated!

@lidaryani I got it working by building [Jonlong's caffe version](https://github.com/mohamed-ezz/caffe/tree/jonlong) and running Cascaded-FCN with that one. See also the [Cascaded-FCN jupyter notebook](https://github.com/IBBM/Cascaded-FCN/blob/master/notebooks/cascaded_unet_inference.ipynb) and issue #3

Reason is to be able to display sample images online while we don't have a dicom viewer yet. As soon as we have that it should be easy to change...