Marcel Falkiewicz

Provide tissue-class-specific TSNR

3

At this moment the reports provide averaged TSNR over the entire brain. Because GM, WM and CSF have very different levels of TSNR, a lot of information is lost in...

TFCE support?

2

Hello, I would like to ask whether you plan on adding TFCE support in RandomiseGroupLevel? It is specified in the documentation and command-line arguments, but says it is not yet...

Move transition matrix computation outside of main function

3

Refactoring the kernel normalization and transition matrix computation as independent function will allow for more code re-use.

Transition matrix - swapped dimensions?

3

Hi @satra, in the current implementation, Markov matrix is calculated by taking sums along axis 1: `d_alpha = np.power(np.array(L_alpha.sum(axis=1)).flatten(), -1)` And multiplying each row by the respective inverse sum: `L_alpha...