Mikhail Dozmorov

There is an awesome summary of the new pipe operator, by Aedin Culhane @aedin [Tweet](https://twitter.com/AedinCulhane/status/1398007351387508736?s=20). Would be ideal for a box-like summary. ``` |> or %>% help("|>") for help |>...

Thanks, Maria, I followed your instructions verbatim, but the problem still persists. I did reinstall immunarch from the dev branch, updated all packages, ensured global and local workspace restoring is...

It didn't help. The `R --vanilla` session still senses the installation and ``` Skipping install of 'immunarch' from a github remote, the SHA1 (37d06bef) has not changed since last install....

Experiencing the same issue. ftp://cooler.csail.mit.edu/coolers is not responding. It seems like a recurrent issue, like #97. Would it be possible to fix? Thanks, Mikhail

As is, it actually looks good on the [website](https://bioc2022.bioconductor.org/)

Thanks, Kun. I wish they would be published, or at least have preprints. If you are familiar with any, please, write a summary and make a PR.

Thanks, Kun. Both are on my reading list

I encountered exactly the same error at the second step of the HiC-Pro run. Tried editing shebang in `~/.local/bin/ice`, it didn't help. The following helped, but it is the unstable...

If still relevant, we generated sets for mm39, as well as for T2T, using the Blacklist software. https://github.com/dozmorovlab/excluderanges

Makes sense. Resizing distortion a minor annoyance, in all other contexts (direct plotting, plotting to pdf) the aheatmap function works as expected. So, a workaround for large heatmaps is to...