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Published 20 hours ago • verified publisher icon maximilianh
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Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input directory and merges everything into a single output directory...

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Can you provide submission of pathogenic sequences other than COVID-19 (e.g influenza virus)?

10 comment

Hi, @maximilianh It's a useful tool for submitting viral sequences in bulk. I am wondering to know if it was possible to provide submission of pathogenic sequences other than COVID-19...

virologist avatar virologist

Please tag a release

6 comment

Hi there I'd like to package this in bioconda (as a first step towards writing a Galaxy wrapper). Can you please tag a release with a version number (preferably a...

pvanheus avatar pvanheus

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verified publisher icon maximilianh

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Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input directory and merges everything into a single output directory...

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