sarscov2 topic

List sarscov2 repositories

covariants

316

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113

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Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.

mutation-distribution

V-pipe

130

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45

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V-pipe is a pipeline designed for analysing NGS data of short viral genomes

multiSub

36

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2

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Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input directory and merges everything into a single output directory...