Matúš Kalaš

Results 36 issues of Matúš Kalaš

Request from an email: Would it be possible for [CRAM, CRAI](https://en.wikipedia.org/wiki/CRAM_(file_format)#:~:text=CRAM%20is%20a%20compressed%20columnar,Hsi%2DYang%20Fritz%20et%20al.&text=Open%20format%3F&text=CRAM%20was%20designed%20to%20be,Map%20(BAM)%20file%20formats.) and [beagle](https://faculty.washington.edu/browning/beagle/bref.16Dec15.pdf) to be added to the file formats to the ontology tree?

concept/term addition

Updating the citation(s) to reflect the current and recent contributors. - [x] Update the recommended citation in README - [ ] Update CITATION.bib - [ ] Add .cff - [...

access | publication | release
high priority

* Merging Comput.*XX topics into XXinformatics * Broadening Lab/experimental techniques to include all means of data acquisition TODOs: - [ ] Fix involved defs, synonyms, links, ... - [ ]...

manual merge needed
merge anytime

These have been much improved in #783, need another human check with eventual updates.

polishing

From #783 re deprecation on GenomeReviews ID (http://edamontology.org/data_2751): @matuskalas [on 15 Dec 2021](https://github.com/edamontology/edamontology/pull/783/files#r769425237) Although this might be the best option, let's for the sake of being on the safe side...

polishing

a.k.a. "Saturday-night fever" incl.: - Made all links to non-literals (except links to other ontologies. **Please keep it like that, so we can find & improve those in the future**)...

polishing
high priority
manual merge needed

- narrow: Research data management (RDM) - related terms: Research data life cycle (also spelled together, see https://en.wiktionary.org/wiki/life_cycle#English) Note: https://en.wikipedia.org/wiki/Research_data_lifecycle is a redirect to https://en.wikipedia.org/wiki/Data_management

concept/term addition
manual merge needed
merge 2nd

For now we have: - Toxicology (http://edamontology.org/topic_2840, under Medicine and Safety sciences), used 69-times in Bio.tools, 2-times in TeSS - Medical toxicology (http://edamontology.org/topic_3415, under Medicine), not used anywhere known by...

enhancement
help wanted
polishing
more info needed

Open for discussion whether this is too broad, too restrictive, or any other suggestions with respect to the **scope** and its formulation.

help wanted
discussion

- [x] Question is, are nifti1 and nifti2 so different we need to distinguish them? Or asked differently, can tools that read one of them also read the other, at...

bug
help wanted
question
high priority