Matthias König

Currently difficult to distinguish the type of assignment in the report, add icon to the assignment column.

Creators order in SBML is changed randomly

1

libsbml does not respect the order of creator addition to history any more (did it ever?) Check this in libsbml and create bug report.

Integration of dynamic network visualization features using cytoscape.js. This will use `render` and `layout` information to create visualizations in the frontend.

Integration of report generation in python workflows

3

There should be a simple python helper for creating reports for local files (the static report #264 will be a longterm fix). This requires - [x] spinning up a local...

Many of the common COMBINE archive files can be easily displayed in the report. - [ ] png - [ ] jpeg - [ ] tif - [ ] svg...

Some examples fail now in Xpp conversion: ``` # example(model_id="112836_HH-ext") # example(model_id="SkM_AP_KCa") ```

Currently, CVTerms (Annotation) and Notes supported. But support for custom XML Annotation is missing. - [ ] support key:value store - [ ] support general annotations

Add option for validation of SBML files. The validation information should be available via the frontend report (as errors and warnings).

Writing the manuscript.