Matthias König
Matthias König
References are often complicated to resolve from the the flatfile. It would be necessary to parse the comments for that (and probably not possible to solve this in a clean...
Updated the issue to reflect the discussion below.
In the flat file the substances are only provided via their names. To my knowledge no name to brenda ligand or chebi mapping file exists which could be used for...
``` ERROR:root:1.14.12.20_): BRENDA key not supported in line: `)` ERROR:root:1.14.21.12_): BRENDA key not supported in line: `)` ERROR:root:1.2.99.8_PR: could not be parsed: `#1# Sulfolobus acidocaldarius Q4J6M3 AND Q4J6M6 AND Q4J6M5`...
The CSS inlining is removing the closing characters of single tags. E.g. - `` is replaced with `` - `` is replaced with `` This makes the library unusable in...
Hi all, How can I zoom in/out to display more/less columns. Or alternatively how can I change the font size & column width easily I have csv files with many...
Hi all, there are currently some issues with how annotations are stored in cobrapy. [1] MIRIAM qualifiers are dropped RDF annotations are triples of the form (subject - predicate -...
In the discussion with @Midnighter it came up that there should be a generic support for compressed files for the various io modules. I.e. cobrapy should support the reading and...
When people use legacy models or COBRA matlab models often some confusion arises on - why there are warnings such as `no fbc package`? - legacy models do not contain...