Matthias König

To clarify this: The actual information in the flatfile is: ``` KM #4,5,17,63# 1.7 {2-oxoglutarate} (#4# pH 8.0, 25°C, substrate L-valine ; #5,17# pH 8.0, 37°C, isoenzyme III, valine as...

@Hrovatin This are issues with the Brenda entries. I.e. the entries exist in the database, but have no numerical values. You can easily filter these out or I could provide...

The reasons I kept the -999 entries was because of the associated references which could provide valuable information to modelers. I.e. here is a publication about the kinetics or parameters...

Hi @DeepaMahm, Yes, this is still an open task. I am in the process of doing a more comprehensive mapping to other databases and resources. But this will be a...

Hi @DeepaMahm, thanks for the input. I will have a look at the resource. Best Matthias

These are all incorrect intendations/new lines in the flat file. These must be fixed in the original file, Nothing we can do here for now.

One can use lxml to fix the generated issues as a workaround ```python # css inline (as a side effect removes closing parts of empty tags) html_inline = css_inline.inline(html, extra_css=css)...

+1 this would be great

I also need quadratic terms. Please support this in optlang.

The model is valid, but everything is written in a single line. It could be that the pysb parser is expecting the xml declaration in a separate line then the...