Matthias König

Hi all, I just realized that for steady state simulations, i.e. experiments with `time=-inf` I don't completely understand how this would work with models which have time-dependent events. Currently it...

I get this, but then the all the errors of the `checkConsistencyWithStrictUnits` should be warnings when using `checkConsistency`. I.e. the only difference between the two checks should be that the...

@fbergmann That would be great. Otherwise I have to parse these myself and down-promote them to warnings on my side. The point I don't understand is why there are differences...

@luciansmith This makes a lot of sense. With the introduction of units via the `sbml:units' attribute in SBML Level 3, constants in mathematical expressions can be checked for units. I.e....

Waiting for resolution of https://github.com/sbmlteam/libsbml/issues/385

Please do this again. We create a lot of labels on items and now have to reselect the label section after switching items. Just remember the selected pane. Thanks so...

perfect. thanks. will delete my comments, because unrelated.

@alcaravia The algorithm does not have to be deterministic. E.g. there could be a randomized selection of an initial simplex node for optimization. Or the last solution base/simplex node is...

Here the solution. The trick is to first set a bypass for the positions and then clear the bypass afterwards. The positions remain. ```python p4c.set_node_position_bypass("Gd-EOB-DTPA (liver)", new_x_locations=200, new_y_locations=200, network=1017) p4c.clear_node_property_bypass(["Gd-EOB-DTPA...

This only works when be executed separately. But not all together in a script. I.e. first the nodes bypass has to be set afterwards in a separate call the bypass...